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Hi Mark, Can you share the command that you used? Are you able to open that image in Fsleyes? Mahmoud On Mon, Jan 14, 2019 at 1:33 PM Ke Xu <[log in to unmask]> wrote: > Hi all, > > thank you for reading this message. I recently started a research and > obtained some structural MRI from ADNI1 dataset. When trying to perform > brain extraction using BET in FSL, it came up with following error: > > Image Exception : #22 :: Failed to read volume > /home/fsluser/Desktop/subject1 > Error : Error: short read, file may be truncated > > Does anyone have some experience in processing ADNI dataset or have some > clue on this matter? > > thanks, > > Mark > > ######################################################################## > > To unsubscribe from the FSL list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1 > ######################################################################## To unsubscribe from the FSL list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1