Dear Brunno,
I am not sure to understand why you do not get the required variables in
the workspace - it's implemented here:
https://github.com/spm/spm12/blob/master/config/spm_run_results.m#L84-L87
but, yes, as you found out, spm_jobman will also return the output of
each module.
Best regards,
Guillaume.
On 21/11/2018 12:08, Brunno M. Campos wrote:
> Thank you Guillaume,
>
> Indeed with my script, the spm_jobman were not storing the xSPM on the
> workspace UNTIL I added an output variable to the function:
> [output_list, ~] = spm_jobman('run',matlabbatch);
> The xSPMvar and also the TabDatvar are inside the "output_list" and
> accessible: output_list{1, 1}.TabDatvar.ftr{5,2}(4)) as you mention.
> Thank you very much!
>
> Brunno
>
>
> Em seg, 19 de nov de 2018 às 09:48, Flandin, Guillaume
> <[log in to unmask] <mailto:[log in to unmask]>> escreveu:
>
> Dear Brunno,
>
> The FDRc can be found in TabDat.ftr{5,2}(4)
> https://www.jiscmail.ac.uk/cgi-bin/webadmin?A2=spm;d0934e06.1811
>
> If you run the module:
> SPM > Stats > Results Report
> then the variables SPM, xSPM, TabDat are directly available in the
> MATLAB workspace.
>
> Best regards,
> Guillaume.
>
>
> On 14/11/2018 11:02, Brunno M. Campos wrote:
> > Dear SPM Experts,
> >
> > Is there any field where I can obtain the FDRc value (that is
> printed on
> > the results window) programmatically?
> > Is there any way to create the xSPM programmatically (maybe entering
> > SPM.mat and stats parameters...)?
> > Any tip?
> > Thanks!
> >
> > Brunno
>
> --
> Guillaume Flandin, PhD
> Wellcome Centre for Human Neuroimaging
> UCL Queen Square Institute of Neurology
> London WC1N 3BG
>
--
Guillaume Flandin, PhD
Wellcome Centre for Human Neuroimaging
UCL Queen Square Institute of Neurology
London WC1N 3BG
