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Hi Gina, You can also do this from within FSLeyes, via the "Tools -> Resample image" menu option. Cheers, Paul On Tue, 27 Nov 2018 at 16:31, Matthew Webster <[log in to unmask]> wrote: > > Hello Gina, > You can use fslcreatehd to create a 3D reference of the desired dimensions and use that along with the -applyxfm -init options ( passing an identity matrix to the -init option ) to resample in a more flexible manner. > > Hope this helps, > Kind Regards > Matthew > -------------------------------- > Dr Matthew Webster > FMRIB Centre > John Radcliffe Hospital > University of Oxford > >> On 27 Nov 2018, at 16:05, Georgina Carts <[log in to unmask]> wrote: >> >> Hi there, >> >> I have 4D data with dimensions [516, 516, 75, 99]. I would like to downsample my image to [128, 128, 75, 99], i.e. downsample x- and y-dimensions only. >> >> I tried the flirt tool using -applyisoxfm but it downsampled x, y and z directions. >> >> Does anyone know how to downsampled only x- and y-? >> >> Thanks a lot, >> Gina >> >> ######################################################################## >> >> To unsubscribe from the FSL list, click the following link: >> https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1 > > > > ________________________________ > > To unsubscribe from the FSL list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1 ######################################################################## To unsubscribe from the FSL list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1