Hi All,

Regarding the install of FSL 6.0:

Whether I use sudo or not, I'm getting a certificate verify problem:

Mac OSX Mojave, mac pro 2013. I downloaded the version for High Sierra of the fslinstaller, figuring that was as close as I was going to get. I even tried

>sudo python fslinstaller.py -d /Volumes/Main/Users/dpat/Downloads/temp

just in case Mojave was having a permissions issue...but I get the same problem:

Suggestions appreciated.

Thanks,

Dianne

dpat@Saci:/Volumes/Main/Users/dpat/Downloads% python fslinstaller.py

--- FSL Installer - Version 3.0.12 ---

[Warning] Some operations of the installer require administative rights,

for example installing into the default folder of /usr/local.

If your account is an 'Administrator' (you have 'sudo' rights)

then you will be prompted for your administrator password

when necessary.

When asked a question, the default answer is given in square brackets.

Hit the Enter key to accept this default answer.

[FAILED] [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed (_ssl.c:726)

On Fri, Oct 26, 2018 at 8:16 AM Matthew Webster <[log in to unmask]> wrote:

FSL 6.0.0 has been released. This version has major changes to the lower-level image and matrix libraries to improve capabilities and performance for larger data sets.

* EDDY_QC performs automated dMRI data assessment, both at the single subject and group levels

* FSLEyes: Now includes Jupyter notebook integration, maximum-intensity projection and a new plugin architecture.

* FSLpy includes wrappers for certain FSL commands.

* The HCP1065 standard space DTI templates have been added

* fsl_ents is a tool for extracting component timeseries from an ICA directory ( e.g using the output from FIX )

* The version of eddy is the same as in 5.0.11. A new version of eddy will be released with FSL 6.0.1

* Tools are now NIFTI-2 capable, although this should currently be regarded as beta-functionality.

* This also includes the latest versions of tools introduced since the last major update:

* MIST: a tool for multi-model cortical segmentation.

* MSM: a tool for cortical surface registration.

* BIANCA: A tool for automatic ( trained ) segmentation of white-matter hyperintensities.

The full distribution can be downloaded from

http://www.fmrib.ox.ac.uk/fsldownloads/

either by the installer script or direct download. If you already have FSL installed, the installer script will backup the existing version as part of the install process.

--------------------------------
Dr Matthew Webster
FMRIB Centre
John Radcliffe Hospital
University of Oxford

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Dianne Patterson, Ph.D.

Research Scientist
[log in to unmask]

[log in to unmask]
University of Arizona
Speech and Hearing Science 314

1131 E 2nd Street, Building #71
(Just East of Harvill)

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