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Try

http://gpcrdb.org/

They have a tool for snake plots of GPCRs

Best
Gebhard



Prof. Gebhard F.X. Schertler
Structural Biology ETH Zürich D-BIOL

Head of Biology and Chemistry
Division
Paul Scherrer Institut
Laboratory of Biomolecular Research,
LBR
OFLC 109
CH-5232 Villigen PSI
[log in to unmask]<mailto:[log in to unmask]>
phone +41 56 310 4265<tel:+41%2056%20310%204265>

Am 04.08.2018 um 10:38 schrieb Joana Pereira <[log in to unmask]<mailto:[log in to unmask]>>:

Dear CCP4 community,

I have seen many papers with detailed protein 2d diagrams like this one:

<2D-transmembrane-protein-diagram-A-convenient-representation-of-the-receptor-sequence.jpeg>
However, I can never find a reference for any tool that can compute such diagrams from a 3D structure. Do you know of any?

Many thanks and enjoy the warm weather!

Joana


—
Dr. Joana Pereira
Postdoctoral Researcher
Department of Protein Evolution

Max Planck Institute for Developmental Biology
Max-Planck-Ring 5
72076 Tübingen
GERMANY

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