I have two questions. First, I am trying to do a repeated measures anova. I have a few subjects that have missing time points. I was wondering can randomise handle this. Second, in terms of the contrast file using https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/Randomise/UserGuide as an example. In this webpage it says the contrast file for the repeated measures anova should be
0 0 1 0 0
0 0 0 1 0
0 0 0 0 1
However, this only captures positive differences from the reference level. Because, I am looking for both positive and negative difference i was thinking the contrast file should look like.
0 0 1 0 0
0 0 0 1 0
0 0 0 0 10 0 -1 0 0
0 0 0 -1 0
0 0 0 0 -1
Am I getting this correct or am I completely wrong?
Aaron Tanenbaum
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