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Every slice seems to be taking 3+ hours to complete. I have plenty of cores(12) and ram (64gb) available. looking the activity monitor xfibres 156MB of ram On Tue, Jul 10, 2018 at 3:24 AM, Krieger, Donald N. <[log in to unmask]> wrote: > Hi Joseph, > > > > If it’s still running take a look at how much memory it is using, both > resident and virtual. > > I have seen bedpostx jobs run interminably on a single core when I had > more than two jobs running on a multi-core device which shares 8 GBytes of > memory. > > I a lot of virtual memory is in use, the job is likely going to the disk > often for memory space which slows things down by more than an order of > magnitude. > > I also have had jobs which ran interminably for no reason that I could > identify but I presumed that there was a problem with the scan quality > which was causing the problem. > > > > I hope this is helpful. > > > > Best – Don > > > > *From:* FSL - FMRIB's Software Library [mailto:[log in to unmask]] *On > Behalf Of *Moises Hernandez > *Sent:* Monday, July 9, 2018 10:45 PM > *To:* [log in to unmask] > *Subject:* Re: [FSL] BEDPOSTX - Still Running After 5 Days > > > > Hi Joseph, > > > > It is possible that something did not work correctly, > > but bedpostx can take 1 or 2 days if you use a single CPU core, > > or even more if your data is high resolution. > > > > Do you get any message at all? > > > > An alternative is to use an NVIDIA gpu: > > https://users.fmrib.ox.ac.uk/~moisesf/Bedpostx_GPU/ > > > > Moises. > > > > On 9 July 2018 at 21:39, VA Research <[log in to unmask]> > wrote: > > Hello Experts, > > > > Any ideas, why it would be taking this long to complete one DTI image? > > > > Thanks so much, > > > > Joseph Veliz > > > ------------------------------ > > To unsubscribe from the FSL list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1 > > > > > ------------------------------ > > To unsubscribe from the FSL list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1 > > ------------------------------ > > To unsubscribe from the FSL list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1 > ######################################################################## To unsubscribe from the FSL list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1