 |
 |
Hello, Using the alternate-reference ( or “expanded functional” ) option in FEAT inserts an “intermediate’ registration step between the functional and structural data. This intermediate transform is combined with the other registrations to form ( e.g. ) the functional to standard transform. Kind Regards Matthew -------------------------------- Dr Matthew Webster FMRIB Centre John Radcliffe Hospital University of Oxford On 22 Jun 2018, at 21:19, Jodi Gilman <[log in to unmask]<mailto:[log in to unmask]>> wrote: Hi, I was having some trouble registering my task-fMRI run to the structural template- however, when I used a T2 topup scan as the alternative reference image in FEAT (e.g. same space, but clearer image), the registration worked well. My question is, if you use an alternative reference image for registration, then how does the task-fMRI get registered to the structural? Or does it not? Thank you, Jodi ######################################################################## To unsubscribe from the FSL list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1 ######################################################################## To unsubscribe from the FSL list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1