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[CCPPETMR/SIRF-SuperBuild] sirf python packaging (#109)
Casper da Costa-Luis <[log in to unmask]>: Apr 24 01:29PM

@casperdcl pushed 1 commit.
 
32b1332 missing packages
 
 
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Casper da Costa-Luis <[log in to unmask]>: Apr 24 02:04PM -0700

@casperdcl pushed 2 commits.
 
011cc36 copies the .so into the site-packages
1f74917 pip -> setup.py
 
 
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Edoardo Pasca <[log in to unmask]>: Apr 24 02:09PM -0700

The conda built SIRF works, except #111
 
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Casper da Costa-Luis <[log in to unmask]>: Apr 24 11:11PM

btw, docker image sizes for different python sources:
 
- virtualenv: 2.84GB
- miniconda: 2.98GB
- miniconda (update --all): 3GB
 
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Casper da Costa-Luis <[log in to unmask]>: Apr 24 11:13PM

@casperdcl pushed 2 commits.
 
08a9712 missing docker devel cache
9c32624 pyvenv -> miniconda
 
 
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[CCPPETMR/SIRF-SuperBuild] conda built gadgetron cannot load shared library (#111)
Edoardo Pasca <[log in to unmask]>: Apr 24 05:03PM

Needs to set the `LD_LIBRARY_PATH` in the anaconda environment.
 
```
04-24 16:58:36.922 INFO [GadgetStreamController.cpp:276] Reader dll: gadgetron_mricore
04-24 16:58:36.922 INFO ...more
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[CCPPETMR/CCPPETMR_VM] current VM screen lock comes on too soon (#80)
Kris Thielemans <[log in to unmask]>: Apr 24 01:41AM -0700

typing the following in the terminal disables it
```
gsettings set org.gnome.desktop.screensaver lock-enabled false
gsettings set org.gnome.desktop.screensaver idle-activation-enabled false
``` ...more
Kris Thielemans <[log in to unmask]>: Apr 24 08:57AM

actually, what the above does is make sure you don't have to type the password. the screensaver still comes on. could just increase the delay I guess.
 
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Edoardo Pasca <[log in to unmask]>: Apr 24 04:29AM -0700

By the way, I'm quite [surprised ](https://github.com/CCPPETMR/CCPPETMR_VM/blob/master/scripts/first_run.sh#L34)this is an issue at all.
Maybe I forgot to run `first_run.sh`?
 
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Kris Thielemans <[log in to unmask]>: Apr 24 11:34AM

not sure how we could check if you ran it.
would this explain #78?
 
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Edoardo Pasca <[log in to unmask]>: Apr 24 04:44AM -0700

Possibly. I'll do that now and upload again.
When you do too many things together...
 
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Kris Thielemans <[log in to unmask]>: Apr 24 12:02PM

not sure if it's worth uploading now? There's a few other VM issues that need sorting out as well. Depends on how much effort this is for you.
 
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Edoardo Pasca <[log in to unmask]>: Apr 24 12:39PM

One obvious way to check if I'd run it is to see if the cursor is large. It is large in my VM. So I've run the `first_run.py` script.
 
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Kris Thielemans <[log in to unmask]>: Apr 24 06:01AM -0700

yup. large in mine as well. Also a bunch of portuguese etc languages installed (but not UK English). I guess you'll have to create a new one from scratch and just check it yourself (did you put the ...more
Kris Thielemans <[log in to unmask]>: Apr 24 09:31AM -0700

running `update_VGA.sh` myself seems to have fixed my VM. I've rebooted it about 6 times without trouble. hard to be sure of course.
 
can others please try the new VM, run `updateVGA.sh` and then ...more
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[CCPPETMR/CCPPETMR_VM] added delay to screen lock (#82)
Edoardo Pasca <[log in to unmask]>: Apr 24 11:23AM

addresses #80
 
however, the screen lock removal was already in place.
You can view, comment on, or merge this pull request online at:
 
https://github.com/CCPPETMR/CCPPETMR_VM/pull/82
...more
David Atkinson <[log in to unmask]>: Apr 24 03:05PM

This isn't top priority, it's just that it was a bit frustrating that the screen locked so quickly - no need to completely disable the screen lock though. I wasn't sure why I couldn't change the ...more
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[CCPPETMR/CCPPETMR_VM] write access to shared folder (#76)
Kris Thielemans <[log in to unmask]>: Apr 24 04:58AM -0700

@DANAJK do we still have to do anything here? If not, close it.
 
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David Atkinson <[log in to unmask]>: Apr 24 02:56PM

I have a set-up that seems to work and I updated the instructions. Note it required running the id command in the VM and using the user and group id reported by that. This does not seem to be the same ...more
David Atkinson <[log in to unmask]>: Apr 24 02:56PM

Closed #76.
 
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[CCPPETMR/CCPPETMR_VM] README should refer to update_VGA.sh (#81)
Kris Thielemans <[log in to unmask]>: Apr 24 08:54AM

Our README gives explicit mount instructions etc for the VGA, but those don't necessarily work. Replace with calling `update_VGA.sh` (note that this doc is also somewhere else I believe, but that's ...more
Edoardo Pasca <[log in to unmask]>: Apr 24 04:27AM -0700

closed with https://github.com/CCPPETMR/CCPPETMR_VM/commit/2d0173e04f326e21792fffa3f121312fe6a8edaf
 
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Edoardo Pasca <[log in to unmask]>: Apr 24 11:27AM

Closed #81.
 
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[CCPPETMR/CCPPETMR_VM] VM starts as bash shell second time (#77)
Kris Thielemans <[log in to unmask]>: Apr 24 09:08AM

This hasn't fixed the problem. I just did a reboot where the X-server failed to start (blinking screen). I also noticed that the VM captures the mouse (but doesn't display it), which is quite ...more
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[CCPPETMR/CCPPETMR_VM] problem adding Guest Additions CD (#59)
Kris Thielemans <[log in to unmask]>: Apr 24 01:53AM -0700

This should have been fixed by 349bd2e4b498d4e18cabf69a9b9b844ad97b3460. @DANAJK, please reopen if not.
 
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Kris Thielemans <[log in to unmask]>: Apr 24 01:53AM -0700

Closed #59.
 
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[CCPPETMR/CCPPETMR_VM] VB update (#69)
Kris Thielemans <[log in to unmask]>: Apr 24 08:47AM

Closed #69.
 
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Kris Thielemans <[log in to unmask]>: Apr 24 01:47AM -0700

using 5.2.8 at present
 
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[CCPPETMR/CCPPETMR_VM] install network_manager? (#79)
Kris Thielemans <[log in to unmask]>: Apr 24 08:46AM

@casperdcl, @bathomas, @nikefth. Any reason not to
```
sudo apt-get install network-manager network-manager-gnome
```
only 20MB download.
 
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