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Hello,
 Can you try running:

$FSLDIR/fslpython/bin/conda env create -f $FSLDIR/etc/fslconf/fslpython_environment.yml

and check if imglob etc are created in $FSLDIR/bin?

Kind Regards
Matthew

--------------------------------
Dr Matthew Webster
FMRIB Centre 
John Radcliffe Hospital
University of Oxford

On 27 Apr 2018, at 16:03, Wang Lei <[log in to unmask]> wrote:

Dear Matthew,

$FSLDIR/bin/fslpython/env is an empty directory.




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在2018年04月27日 22:49，Matthew Webster 写道：
Hello,
  Can you let me know what is in the envs subdirectory?

Kind Regards
Matthew
--------------------------------
Dr Matthew Webster
FMRIB Centre 
John Radcliffe Hospital
University of Oxford

On 27 Apr 2018, at 14:57, Wang Lei <[log in to unmask]> wrote:

Dear expert,

Yes, I have the fslpython directory under $FSLDIR. 

There are several sub-directories under fslpython: 

    bin, compiler_compact, conda-meta, envs, etc, include, lib, pkgs, share, ssl, x86_64-conda_cos6-linux-gnu

and a file, LICENSE.txt

What should I do next ?

2018-04-27 18:10 GMT+08:00 Matthew Webster <[log in to unmask]>:
Hello,
          Do you have a directory called fslpython in $FSLDIR?

Kind Regards
Matthew
--------------------------------
Dr Matthew Webster
FMRIB Centre
John Radcliffe Hospital
University of Oxford

> On 27 Apr 2018, at 10:27, Sungoku <[log in to unmask]> wrote:
>
> Dear Experts:
> I installed FSL 5.0.11 under Ubuntu16.04 just now，using fslinstaller.py.
> Everything reported success, no errors.
> I tested a few commands and gui, works fine too.
> BUT, when I using fslvbm commands, error message showed: /usr/local/fsl/bin/imglob not found
> I checked my $FSLDIR/bin directory, and did not find the imglob file .
> Actually, I compared this bin/ directory between 5.0.11 and 5.0.10, and found three files missing :
>
> imglob, imcp, immv
>
> Are these files deleted in new version now?? But fslvbm and TBSS need imglob to run.
> Where can I get these missing files?