Hello,
Can you tell me if $FSLDIR/bin/imcp exists on your system? Also is there a folder called fslpython ( either in $FSLDIR, or anywhere else on your system? ).
Kind Regards
Matthew
--------------------------------
Dr Matthew Webster
FMRIB Centre
John Radcliffe Hospital
University of Oxford
> On 19 Apr 2018, at 17:15, Shengwei Zhang <[log in to unmask]> wrote:
>
> Hi,
>
> I'm running FEEDS to test my newly installed FSL 5.0.11 on Ubuntu 16.04LTS, and I got the following error:
>
> Starting FEAT at Thu Apr 19 16:02:30 UTC 2018
> child process exited abnormally
> while executing
> "fsl:exec "${FSLDIR}/bin/feat ${FEEDSDIR}/results/design.fsf""
> invoked from within
> "if { $feeds(feat) } {
>
> puts "\nStarting FEAT at [ exec date ]"
>
> # fix FEAT setup file to use FEEDSDIR and FSLDIR
> fsl:exec "cp ${FEEDSDIR}/data/fmri.fe..."
> (file "./RUN" line 218)
>
> When I look at the LOG:
>
> To view the FEAT progress and final report, point your web browser at /home/szhang/work/feeds/results/fmri.feat/report_log.html
> child process exited abnormally
> while executing
> "fsl:exec "${FSLDIR}/bin/feat ${fsfroot}.fsf -D $FD -I $session -prestats" -b $prestatsTime -h $initID $jobHalt -N feat2_pre -l logs "
> (procedure "firstLevelMaster" line 168)
> invoked from within
> "firstLevelMaster $session"
> invoked from within
> "if { $done_something == 0 } {
>
> if { ! $fmri(inmelodic) } {
> if { $fmri(level) == 1 } {
> for { set session 1 } { $session <= $fmri(mult..."
> (file "/usr/local/fsl/bin/feat" line 390)
>
> FATAL ERROR ENCOUNTERED:
> COMMAND:
> /usr/local/fsl/bin/feat /home/szhang/work/feeds/results/design.fsf
>
> Any thoughts? I haven't much experience of feat. Thanks.
>
> Shengwei
