Dear Sayli

Here are some options from Table 10.1 of this book chapter

https://link.springer.com/chapter/10.1007/978-94-024-1069-3_10

cons-PPISP	Uses sequence profiles and solvent accessibility for residues and their neighbours	http://pipe.scs.fsu.edu/ppisp.html	Zhou and Shan (2001)
meta-PPISP	Metaserver using cons-PPISP, PINUP and Promate predictions	http://pipe.scs.fsu.edu/meta-ppisp.html	Qin and Zhou (2007)
CPORT	Consensus prediction from six different methods	http://haddock.science.uu.nl/services/CPORT	de Vries and Bonvin (2011)
PRISE	Atomic composition, residue type and solvent exposure of a central surface residue plus its neighbours	http://prise.cs.iastate.edu/index.py	Jordan et al. (2012)
VORFFIP	Considers a variety of structural, energetic, evolutionary and crystallographic parameters	http://www.bioinsilico.org/VORFFIP	Segura et al. (2011)
	i

I don't know if they are all still functional: unhappily there tends to be quite a high turnover of such servers

Best wishes

Daniel

On 02/03/18 07:47, Sayli Dalal wrote:

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Dear all,

Can anyone help me with a web server or method for prediction of interfaces for protein-protein interaction?

Thanks and best regards,

Sayli Dalal

Post-Doctoral Fellow

Dept. of Biophysics

NIMHANS

-- 
Dr Daniel John Rigden                 Tel:(+44) 151 795 4467
Institute of Integrative Biology      FAX:(+44) 151 795 4406
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