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Hi Xixi, There should be another section to the right, containing voxel intensities, e.g.: https://users.fmrib.ox.ac.uk/~paulmc/fsleyes/userdoc/latest/_images/quick_start_interface_2.png Do you just need to resize the panel? Cheers, Paul On 23 February 2018 at 13:48, Yang, Xixi <[log in to unmask]> wrote: > Dear Paul > > > Many thanks for your reply. I could see the coordinates X, Y and Z, and > the volume in the 'location panel', but no intensity in the panel. And I am > using mac ios system. > > > Best wishes > > > Xixi > ------------------------------ > *From:* FSL - FMRIB's Software Library <[log in to unmask]> on behalf of > paul mccarthy <[log in to unmask]> > *Sent:* 21 February 2018 20:45:24 > *To:* [log in to unmask] > *Subject:* Re: [FSL] Intensity in fsleyes > > Hi Xixi, > > You should be able to get the intensity of the current voxel in the > 'location panel', which is at the bottom right of the FSLeyes window. > > If your image is a FSL atlas, you can open the "atlas panel" (Settings -> > Ortho view -> Atlas panel), to browse the atlases and regions. > > Cheers, > > Paul > > On 21 February 2018 at 15:00, SUBSCRIBE FSL Xixi. Y <[log in to unmask]> > wrote: > > Dear Experts > > Would you mind letting me know where could I get the 'Intensity' bar in > fsleyes? I have a parcellation mask with 208 intensities, and together with > an atlas, I could find out the name of the brain region in fslview > previously. In another word, when I point at a brain area, it will tell me > a number (as the intensity), then I know the name of the brain area. > However, I am now using fsleyes and could not find the 'intensity' bar. > Therefore, I could not make sure which region I am pointing at. Could you > please help with this. Many thanks! > > Best wishes > > Xixi > > >