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Dear Jan,

have you tried adjusted the scaling of the image in fslview/fsleyes? It is possible that it is all there but that the display scale is set such that it looks black.

Jesper

On 30 Jan 2018, at 08:52, Dave Yas <[log in to unmask]> wrote:

Hi,

I am getting a blank FA file after running DTIFIT on all my subjects.

I ran BET, then Eddy current, then DTIFIT.

The previous steps were okay, but I had a problem with this step (DTIFIT).

I got no error messages everything ran smoothly which is why i don't know what hints to give.

Can someone help please?

Dave