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I am new to building into an EM map, and I wonder if I could get a recommendation for some standard routine for programs to use. I tried "find helixes and strands" tool in phenix, it found some secondary structure elements, however, it seems that there is more that could be done automatically. Is there any standard set of tools to use for automatic building in EM map of about 4A resolution?


phenix.map_to_model may be able to do more:
https://www.phenix-online.org/documentation/reference/map_to_model.html

Pavel