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Today's topic summary
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- [CCPPETMR/SIRF-SuperBuild] merge HDF5_DIR_fixes branch (#44) [1 Update]
http://groups.google.com/group/ccp-petmr-codebot/t/43d44abccc7a477c
- [CCPPETMR/SIRF] Add automatic testing after installation/update to SIRF installation/update scripts using current test scripts via CTest. (#48) [2 Updates]
http://groups.google.com/group/ccp-petmr-codebot/t/996e160d8adf243e
- [CCPPETMR/SIRF-SuperBuild] sourcing env_ccppetmr.csh can let it abort (#40) [1 Update]
http://groups.google.com/group/ccp-petmr-codebot/t/d241ededda82d9fc
- [CCPPETMR/SIRF-SuperBuild] problems with finding Python (#48) [1 Update]
http://groups.google.com/group/ccp-petmr-codebot/t/bb43f15889fc5ffc
- [CCPPETMR/SIRF-SuperBuild] Use Matlab_ROOT_DIR as opposed to MATLAB_ROOT (#45) [1 Update]
http://groups.google.com/group/ccp-petmr-codebot/t/32d85b4ebc3acffd
- [CCPPETMR/SIRF] FindMATLAB.cmake fails for MATLAB 2017a (#41) [1 Update]
http://groups.google.com/group/ccp-petmr-codebot/t/c454a2dfcd77c7f6
- [CCPPETMR/SIRF] [CMake] Use CMake's FindMatlab.cmake as opposed to our own (#47) [2 Updates]
http://groups.google.com/group/ccp-petmr-codebot/t/e11036e7859fb7b2
- [CCPPETMR/SIRF] set_up_PET gives no info when libload_stir failed (#64) [1 Update]
http://groups.google.com/group/ccp-petmr-codebot/t/f3daf30c6f3b3009
- [CCPPETMR/SIRF-SuperBuild] Dis/Enable ITK support in STIR (#47) [1 Update]
http://groups.google.com/group/ccp-petmr-codebot/t/6cd8c3e7e8eb33dd
- [CCPPETMR/SIRF-SuperBuild] Ctest (#32) [1 Update]
http://groups.google.com/group/ccp-petmr-codebot/t/da9de177440f50ac
- [CCPPETMR/SIRF] SIRF should use std::shared_ptr (#59) [1 Update]
http://groups.google.com/group/ccp-petmr-codebot/t/b0feed7665a23396
- [CCPPETMR/SIRF] Release of 0.9.1 RC1 (#63) [1 Update]
http://groups.google.com/group/ccp-petmr-codebot/t/f3e9cbf493dcbb
- [CCPPETMR/CCPPETMR_VM] Superbuild (#27) [2 Updates]
http://groups.google.com/group/ccp-petmr-codebot/t/37a65c264521da0e
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Topic: [CCPPETMR/SIRF-SuperBuild] merge HDF5_DIR_fixes branch (#44)
URL: http://groups.google.com/group/ccp-petmr-codebot/t/43d44abccc7a477c
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From: Kris Thielemans <[log in to unmask]>
Date: Sep 29 05:21PM
URL: http://groups.google.com/group/ccp-petmr-codebot/msg/17765c1feaf68
devel is now merged. Other things on this branch are for Windows and need to be reviewed, so moving this to v1.0.
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Topic: [CCPPETMR/SIRF] Add automatic testing after installation/update to SIRF installation/update scripts using current test scripts via CTest. (#48)
URL: http://groups.google.com/group/ccp-petmr-codebot/t/996e160d8adf243e
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From: Edoardo Pasca <[log in to unmask]>
Date: Sep 29 02:32PM
URL: http://groups.google.com/group/ccp-petmr-codebot/msg/16e29c91f9d84
Closed #48.
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https://github.com/CCPPETMR/SIRF/issues/48#event-1271759422
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From: Edoardo Pasca <[log in to unmask]>
Date: Sep 29 02:32PM
URL: http://groups.google.com/group/ccp-petmr-codebot/msg/16e29da2a7a91
Closed with 7c820a71a3ee851a0496f86ce42755a5e5e1bd3e
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Topic: [CCPPETMR/SIRF-SuperBuild] sourcing env_ccppetmr.csh can let it abort (#40)
URL: http://groups.google.com/group/ccp-petmr-codebot/t/d241ededda82d9fc
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From: evgueni-ovtchinnikov <[log in to unmask]>
Date: Sep 29 06:42AM -0700
URL: http://groups.google.com/group/ccp-petmr-codebot/msg/16b66fe5eb189
Closed #40 via a9653864503f924767007fffa1e45d226e5dff07.
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Topic: [CCPPETMR/SIRF-SuperBuild] problems with finding Python (#48)
URL: http://groups.google.com/group/ccp-petmr-codebot/t/bb43f15889fc5ffc
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From: Kris Thielemans <[log in to unmask]>
Date: Sep 29 06:11AM -0700
URL: http://groups.google.com/group/ccp-petmr-codebot/msg/169bc0dc823f9
CMake's `FindPythonInterp` doesn't necessarily find the Python that you expect. this currently breaks Travis for Python 3.5.
see comments in #32 for potential resolution
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Topic: [CCPPETMR/SIRF-SuperBuild] Use Matlab_ROOT_DIR as opposed to MATLAB_ROOT (#45)
URL: http://groups.google.com/group/ccp-petmr-codebot/t/32d85b4ebc3acffd
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From: Kris Thielemans <[log in to unmask]>
Date: Sep 29 11:36AM
URL: http://groups.google.com/group/ccp-petmr-codebot/msg/16491d4e26953
Merged #45.
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Topic: [CCPPETMR/SIRF] FindMATLAB.cmake fails for MATLAB 2017a (#41)
URL: http://groups.google.com/group/ccp-petmr-codebot/t/c454a2dfcd77c7f6
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From: Kris Thielemans <[log in to unmask]>
Date: Sep 29 11:34AM
URL: http://groups.google.com/group/ccp-petmr-codebot/msg/1647631317009
Closed #41 via #47.
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Topic: [CCPPETMR/SIRF] [CMake] Use CMake's FindMatlab.cmake as opposed to our own (#47)
URL: http://groups.google.com/group/ccp-petmr-codebot/t/e11036e7859fb7b2
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From: Kris Thielemans <[log in to unmask]>
Date: Sep 29 01:55AM -0700
URL: http://groups.google.com/group/ccp-petmr-codebot/msg/15bc574b5634f
thanks Ben. No idea about the `make -j`. I can't see why this would have happened (certainly not in the PR) nor how to debug the CMake files...
The `pyconfig.h` problem is because CMake's
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From: Kris Thielemans <[log in to unmask]>
Date: Sep 29 04:34AM -0700
URL: http://groups.google.com/group/ccp-petmr-codebot/msg/164760f856751
Merged #47.
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https://github.com/CCPPETMR/SIRF/pull/47#event-1271480908
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Topic: [CCPPETMR/SIRF] set_up_PET gives no info when libload_stir failed (#64)
URL: http://groups.google.com/group/ccp-petmr-codebot/t/f3daf30c6f3b3009
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From: Kris Thielemans <[log in to unmask]>
Date: Sep 29 11:31AM
URL: http://groups.google.com/group/ccp-petmr-codebot/msg/16447b6b8580b
presumably this is hidden by the eval. The result is however that the user doesn't know why it failed. In my case, it was because of the conflict with shared libraries (matlab vs compiled), but I
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Topic: [CCPPETMR/SIRF-SuperBuild] Dis/Enable ITK support in STIR (#47)
URL: http://groups.google.com/group/ccp-petmr-codebot/t/6cd8c3e7e8eb33dd
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From: Kris Thielemans <[log in to unmask]>
Date: Sep 29 04:10AM -0700
URL: http://groups.google.com/group/ccp-petmr-codebot/msg/163243975a2b9
STIR compilation fails with too old ITK. See https://github.com/UCL/STIR/issues/114
we'll disable ITK support in STIR for now but this will have to be re-enabled later once STIR is fixed.
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Topic: [CCPPETMR/SIRF-SuperBuild] Ctest (#32)
URL: http://groups.google.com/group/ccp-petmr-codebot/t/da9de177440f50ac
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From: Edoardo Pasca <[log in to unmask]>
Date: Sep 29 04:09AM -0700
URL: http://groups.google.com/group/ccp-petmr-codebot/msg/16311064f2f8a
Merged #32.
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Topic: [CCPPETMR/SIRF] SIRF should use std::shared_ptr (#59)
URL: http://groups.google.com/group/ccp-petmr-codebot/t/b0feed7665a23396
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From: evgueni-ovtchinnikov <[log in to unmask]>
Date: Sep 29 03:54AM -0700
URL: http://groups.google.com/group/ccp-petmr-codebot/msg/16240f39c1eb7
Closed #59 via ac86a8121c49000a15b78d28f0225fc6a1ab9d28.
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Topic: [CCPPETMR/SIRF] Release of 0.9.1 RC1 (#63)
URL: http://groups.google.com/group/ccp-petmr-codebot/t/f3e9cbf493dcbb
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From: Edoardo Pasca <[log in to unmask]>
Date: Sep 29 10:48AM
URL: http://groups.google.com/group/ccp-petmr-codebot/msg/161ef9d2b4b40
TODO list for the release of 0.9.1 RC1
## SIRF:
- [ ] evg close https://github.com/CCPPETMR/SIRF/issues/59 and add in commit
- [ ] Check README in ctest
- [ ] Merge ctest
- [ ] Kris to
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Topic: [CCPPETMR/CCPPETMR_VM] Superbuild (#27)
URL: http://groups.google.com/group/ccp-petmr-codebot/t/37a65c264521da0e
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From: Edoardo Pasca <[log in to unmask]>
Date: Sep 29 02:50AM -0700
URL: http://groups.google.com/group/ccp-petmr-codebot/msg/15ec34456bdc6
@paskino pushed 1 commit.
1d8dc46 remove sudo
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From: Edoardo Pasca <[log in to unmask]>
Date: Sep 29 09:48AM
URL: http://groups.google.com/group/ccp-petmr-codebot/msg/15f120870a42b
@paskino pushed 1 commit.
56f20fa remove checkout ctest
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