The command "autoaq" (automatic atlas queries) can be used for this. Use 0.95.

All the best,

Anderson

On Wednesday, 23 August 2017, SUBSCRIBE FSL Xixi. Y <[log in to unmask]> wrote:

Dear experts

I have got some results after TBSS randomise and would like to see which are the clusters showing significance (p < 0.05)

Based on 'Cluster' webpage, I got the values of clusters in size order, but how could I get the names (atlas) of the clusters? Is there anyway to output the names (atlas) of the clusters and the values, etc.

Besides, when I run the command:
cluster --in=<filename> --thresh=<value>
is it correct if I put 0.05 as the thresh value? Or should I put 0.95 based on TBSS commands?

Many thanks in advance!

Best wishes

Xixi