Oh well. Which of the 2 options (click, or update_VGA.sh) did you try? And try the other one :-;
From: [log in to unmask] [mailto:[log in to unmask]]
Sent: 23 May 2017 14:36
To: Thielemans, Kris <[log in to unmask]>; [log in to unmask]
Subject: RE: VM updating Guest Additions
Got this error:
Could not mount the media/drive 'C:\Program Files\Oracle\VirtualBox/VBoxGuestAdditions.iso' (VERR_PDM_MEDIA_LOCKED).
From: Thielemans, Kris [mailto:[log in to unmask]]
Sent: 23 May 2017 14:24
To: Ovtchinnikov, Evgueni (STFC,RAL,SC); [log in to unmask]<mailto:[log in to unmask]>
Subject: RE: VM updating Guest Additions
Shutdown machine, then go to VB interface, click the VM, then settings, storage, next to IDE controller, click the left most icon (add optical drive). Leave empty. Then it should work.
If you then “insert” the Guest Additions, it will ask if you want to run the software. You could give that a go if you want. Or just cancel.
From: [log in to unmask]<mailto:[log in to unmask]> [mailto:[log in to unmask]]
Sent: 23 May 2017 13:19
To: Thielemans, Kris <[log in to unmask]<mailto:[log in to unmask]>>; [log in to unmask]<mailto:[log in to unmask]>
Subject: RE: VM updating Guest Additions
Drive addition buttons in Storage do not work.
From: Thielemans, Kris [mailto:[log in to unmask]]
Sent: 23 May 2017 12:57
To: Ovtchinnikov, Evgueni (STFC,RAL,SC); [log in to unmask]<mailto:[log in to unmask]>
Subject: RE: VM updating Guest Additions
Aargh.
Same here. Did you try to add it?
From: [log in to unmask]<mailto:[log in to unmask]> [mailto:[log in to unmask]]
Sent: 23 May 2017 12:42
To: Thielemans, Kris <[log in to unmask]<mailto:[log in to unmask]>>; [log in to unmask]<mailto:[log in to unmask]>
Subject: RE: VM updating Guest Additions
Could not insert the VirtualBox Guest Additions disk image file into the virtual machine SIRF_VM_0.9.0-rc2, as the machine has no optical drives. Please add a drive using the storage page of the virtual machine settings window.
From: Thielemans, Kris [mailto:[log in to unmask]]
Sent: 23 May 2017 12:35
To: Ovtchinnikov, Evgueni (STFC,RAL,SC); [log in to unmask]<mailto:[log in to unmask]>
Subject: RE: VM updating Guest Additions
Yes. Thought so.
Can you try to “insert” the Guest Additions CD” (in the Devices menu of VB) and then rerun?
From: [log in to unmask]<mailto:[log in to unmask]> [mailto:[log in to unmask]]
Sent: 23 May 2017 12:25
To: Thielemans, Kris <[log in to unmask]<mailto:[log in to unmask]>>; [log in to unmask]<mailto:[log in to unmask]>
Subject: RE: VM updating Guest Additions
Thanks.
This works ok on VB 5.1, but does not help on VB 5.0, because it is impossible to pull:
Could not resolve host: github.com
From: CCP-PETMR Developers list [mailto:[log in to unmask]] On Behalf Of Thielemans, Kris
Sent: 23 May 2017 11:11
To: [log in to unmask]<mailto:[log in to unmask]>
Subject: Re: VM updating Guest Additions
No
Actually the problem is that CCPPETMR_VM is on the test_vm branch.
So
cd ~/devel/CCPPETMR_VM
git checkout master
git pull
update_VM.sh
sudo update_VGA.sh
From: CCP-PETMR Developers list [mailto:[log in to unmask]] On Behalf Of Edoardo Pasca
Sent: 23 May 2017 11:09
To: [log in to unmask]<mailto:[log in to unmask]>
Subject: Re: VM updating Guest Additions
Yes you are right! However, because you run the update_VGA.sh with sudo powers (and environment) you don’t have the path set up correctly
So you should explicitly point to the script as:
sudo /home/sirfuser/devel/CCPPETMR_VM/scripts/update_VGA.sh
Edo
From: Ovtchinnikov, Evgueni (STFC,RAL,SC)
Sent: 23 May 2017 11:01
To: Pasca, Edoardo (STFC,RAL,SC) <[log in to unmask]<mailto:[log in to unmask]>>; [log in to unmask]<mailto:[log in to unmask]>
Subject: RE: VM updating Guest Additions
But update_VM.sh is supposed to do all git pulls, is it not?
From: Pasca, Edoardo (STFC,RAL,SC)
Sent: 23 May 2017 11:00
To: Ovtchinnikov, Evgueni (STFC,RAL,SC); [log in to unmask]<mailto:[log in to unmask]>
Subject: RE: VM updating Guest Additions
First you have to
git pull
Edo
From: CCP-PETMR Developers list [mailto:[log in to unmask]] On Behalf Of Evgueni Ovtchinnikov
Sent: 23 May 2017 10:55
To: [log in to unmask]<mailto:[log in to unmask]>
Subject: Re: VM updating Guest Additions
I got
update_VGA.sh: command not found
(both on master and release-0.9.0)
From: CCP-PETMR Developers list [mailto:[log in to unmask]] On Behalf Of Thielemans, Kris
Sent: 23 May 2017 09:04
To: [log in to unmask]<mailto:[log in to unmask]>
Subject: VM updating Guest Additions
Hi all
I have created a script to get your Guest Additions in line with the VB version that you have installed, based on Ben’s suggestions. I haven’t tried this on the new VM yet though. Please let us know, and possibly re-open
https://github.com/CCPPETMR/CCPPETMR_VM/issues/9
start the VM, open a terminal and type
update_VM.sh
update_VGA.sh
Kris
From: Thielemans, Kris
Sent: 22 May 2017 17:47
To: [log in to unmask] <[log in to unmask]<mailto:[log in to unmask]>>; [log in to unmask]<mailto:[log in to unmask]>
Subject: RE: VM update and release of 0.9.0
Sigh.
I’ve updated https://github.com/CCPPETMR/CCPPETMR_VM/issues/9 with some extra info. Let’s discuss the VGA issue there.
Kris
From: [log in to unmask]<mailto:[log in to unmask]> [mailto:[log in to unmask]]
Sent: 22 May 2017 18:17
To: Thielemans, Kris <[log in to unmask]<mailto:[log in to unmask]>>; [log in to unmask]<mailto:[log in to unmask]>
Subject: RE: VM update and release of 0.9.0
Firstly, it took several minutes to start, and there were error messages (incomprehensible to me, and I could not copy them).
Major issue was: I had Gadgetron running, but Gadgetron demo scripts (on VM) could not connect to it.
Also, I could not update because github was claimed inaccessible – apparently there was no internet connection on VM.
STIR demos worked ok.
It was VB 5.0.12, by the way, so there is still hope 5.0.40 would work.
From: Thielemans, Kris [mailto:[log in to unmask]]
Sent: 22 May 2017 17:04
To: Ovtchinnikov, Evgueni (STFC,RAL,SC); [log in to unmask]<mailto:[log in to unmask]>
Subject: RE: VM update and release of 0.9.0
Thanks Evgueni
Can you say what went wrong with VB 5.0? This might not be so good as the PSMR guys have VB 5.0.40.
Kris
From: CCP-PETMR Developers list [mailto:[log in to unmask]] On Behalf Of Evgueni Ovtchinnikov
Sent: 22 May 2017 18:01
To: [log in to unmask]<mailto:[log in to unmask]>
Subject: Re: VM update and release of 0.9.0
Thanks Edo.
Just tried new VM, all demos running ok. Well done!
Just a couple of minor things:
- start page says Ubuntu 16.04, not 16.10
- the one you gave me last week would not work under Virtual Box 5.0, had to install 5.1 (should be said somewhere).
From: CCP-PETMR Developers list [mailto:[log in to unmask]] On Behalf Of Edoardo Pasca
Sent: 22 May 2017 16:04
To: [log in to unmask]<mailto:[log in to unmask]>
Subject: Re: VM update and release of 0.9.0
Dear all,
The new VM is now on the website.
I’ve updated the download page accordingly with _minimal_ information. http://www.ccppetmr.ac.uk/downloads
You may download the VM at this link
https://www.ccppetmr.ac.uk/sites/www.ccppetmr.ac.uk/files/VM/SIRF_Ubuntu16.10_0.9.0-rc2.ova
have fun
Edo
From: Thielemans, Kris [mailto:[log in to unmask]]
Sent: 22 May 2017 08:53
To: Pasca, Edoardo (STFC,RAL,SC) <[log in to unmask]<mailto:[log in to unmask]>>; [log in to unmask]<mailto:[log in to unmask]>
Subject: VM update and release of 0.9.0
Dear Edo and all
I hope to have fixed a potentially serious problem
https://github.com/CCPPETMR/SIRF/issues/31
As the VM will pull from master at present, I have already merged this into master (breaking my own rule…). Otherwise your VM would have this problem.
So now we have a bit of a problem with the construction of the VM. Ideally you’d do this once we’ve tagged, i.e. wait for any other fixes. However, we’re running into time problems. Can you therefore create a new VM this afternoon and put it on the website (and announce to the devel list) such that we can try this on Tuesday morning? (I cannot test today). Sorry.
Can we get some volunteers to test the new VM by Tuesday 1pm? Please report to this list if you tried and on what host system (OS and VirtualBox version).
Kris
From: Thielemans, Kris
Sent: 20 May 2017 19:18
To: [log in to unmask] <[log in to unmask]<mailto:[log in to unmask]>>; [log in to unmask]<mailto:[log in to unmask]>
Subject: RE: SuperBuild and VM update
Hi Edo
Thanks for this. Evgueni and I have done some more fine-tuning and even found a bug in the PET “backward”… The environment variables should be fine now as well. I’ve updated the wiki accordingly earlier today. As you’ve seen, we’ve now tagged SIRF and SIRF-SuperBuild (we’ve decided not to rename this for v0.9.0 as we’re running out of time).
Could you therefore please update the VM (just “update_VM.sh” should be fine, make sure you’re on the master branch of CCPPETMR_VM), create a new OVA and put that on the website? (we cannot use torrent for the official release).
Thanks!
Kris
From: CCP-PETMR Developers list [mailto:[log in to unmask]] On Behalf Of Edoardo Pasca
Sent: 19 May 2017 10:19
To: [log in to unmask]<mailto:[log in to unmask]>
Subject: SuperBuild and VM update
Hi Kris,
Current status:
• VM with UPDATE.sh: the VM built correctly and I run the tests and they run ok. This VM uses system Boost as we do not build it.
• VM with UPDATE.sh: As I said at the meeting it is compacted and ready for testing. I’ve given the VM appliance to Evgueni. You may download it with the attached torrent link.
• SuperBuild: Now every package depending on Boost is compiled using 1.63 version that we download and compile. The CMAKE_INSTALL_PREFIX was not sufficient to let Gadgetron pick the right boost version and I had to use also BOOST_ROOT.
• SuperBuild: At the end of the build we need to set the environment variables. I’ve created an issue https://github.com/CCPPETMR/SIRF-SuperBuild/issues/26
Edo
--
Edoardo Pasca, PhD
Visual Analytics and Imaging Systems Group
Scientific Computing Department, STFC Rutherford Appleton Laboratoty
0044 (0)1235 44 5660
:wq
