> and carve=2.0 means the mesh is created within 2.0 Å of the selected atoms.  Adjust these values to suit.

 

I would advise extreme care when employing such presentation features. They are useful for display

purposes and only when their use is stated as such, but they also open a venue for cognitive biases.

One might want to have a look at how creative use of these ‘blob’ features until things ‘suit’ can

betray the true believer…

 

http://www.ruppweb.org/cvs/br/rupp_2001_NSB_questions_BotA.pdf

https://www.dropbox.com/s/iul2cjbuu4x2o9f/Hanson_2009_retraction_bot_nsmb0709-795.pdf?dl=0

 

Best, BR

 

The first principle is that you must not fool yourself and you are the easiest person to fool.”

Richard P. Feynman