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Dear Jacek,

The results are from whole brain analysis , I would like even ask you one more question pertaining ROI if there is any way i can know which specific ROI that MNI coordinates correspond to, Is there online tool that i can use to see the specific ROI region  where i see the peak ?.

Thanks
Vasudev

On 9 February 2017 at 13:13, Jacek Matuszewski <[log in to unmask]> wrote:
Dear Vasudev,


If that is a region of interest that you have build based on literature or something else then you should know the shape and MNI coordinates for it's center.

If these are results of whole-brain analysis MNI coortinates of each cluster peak are the last 3 columns in spm output table (mm mm mm). You can also right-click on the glass brain, select go to nearest local maximum in certain cluster and check coordinates at the bottom of results window in SPM (coordinates x y, z)

 But generally you have 2 clusters and 1 voxel and MNI coordinates of peaks of those 2 culsters are

9 9 50 (for 168 voxels cluster) and 32 16 10 (24 voxels cluster)

Numbers correspond to X, Y and Z respectively.

Best,


Jacek Matuszewski



On 2017-02-09 12:35, Dev vasu wrote:

Dear all ,

Is there any way to check the MNI coordinates of ROI where i can see statistical significance as shown in the figure in this link http://imgur.com/a/CIGvv.


Thanks
Vasudev

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Laboratory of Brain Imaging (LOBI)
Neurobiology Center
The Nencki Institute of Experimental Biology
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