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Hello All,

We have multishell dMRI data acquired as follows:

PE=AP, 61 directions, b0=700, and 7 b0s
PE=PA, 62 directions, b0=2000, and 7 b0s

How preprocessing of these data differs from the example in FSL Eddy wiki?
How to create index and acqp files and apply topup and eddy?

Thankyou,
Mahmoud