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Hi,

We have been using the latest eddy patch to correct our multiband diffusion
data. For all the 3 subjects that we processed today,  the
eddy-corrected-dwi has almost half of the top of the brain cut off. But
eddy-corrected-dwi-outlier-free images looks correct. Now the question is,
can we simply use the outlier -free data to do further processing?  If no,
what else can be done. I am running eddy on Ubuntu 16 using the centos6
patch. In the past we haven't encountered this problem and any insights
will be greatly appreciated.

Thank you

Regards

VM