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Hi Niels, This helps me to downsample the image but the new size is 98x117x79 while I need it to be 92x92x56. How to fix this? Another question: my goal is to transform a bunch of BET images from individual space to a common space. What do you suggest as the best way to do this? Thanks, Mahmoud On Thu, Jan 12, 2017 at 10:34 AM, Niels Bergsland <[log in to unmask]> wrote: > Hi - you can do this with fslmaths using the -subsamp2 option > > > > On Thu, Jan 12, 2017 at 4:27 PM, Mahmoud <[log in to unmask]> wrote: > >> Hello all, >> >> I want to resample a 3D binary mask of size 233x233x158, 1mm isotropic to >> 92x92x56 2mm isotropic. I used ApplyXFM with the identity matrix. The >> problem is that the center of gravity is replaced at in the transformed >> image. How can I fix this or what would be the best way to do this >> transform? >> >> Thank you, >> Mahmoud >> > > > > -- > Niels Bergsland > Integration Director > Buffalo Neuroimaging Analysis Center > 100 High St. Buffalo NY 14203 > [log in to unmask] >