Dear Matteo, Thank you very much for this tip. I will certainly look into it! best regards Diego Szczupak 2016-10-21 11:27 GMT-02:00 Matteo Bastiani <[log in to unmask]>: > Dear Diego, > > have a look at the FSL course material: > https://fsl.fmrib.ox.ac.uk/fslcourse/ > > The sections about Diffusion MRI analysis and Diffusion Tractography > should cover most of what you are looking for. > > Importantly, BEDPOSTX expects a folder that contains the necessary files > having specific names: > http://fsl.fmrib.ox.ac.uk/fsl/fslwiki/FDT/UserGuide#BEDPOSTX > > > Hope this helps. Cheers, > Matteo > > On 20 Oct 2016, at 19:04, Diego Szczupak <[log in to unmask]> wrote: > > Dear FSL experts > > I am having a hard time to estimate fiber orientation using bedpostX on a > 30 directions mouse DTI. Can some one give me a guideline? > > Best Regards > > Diego Szczupak > > >