 |
 |
-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Dear Sam, as far as I know, RCrane has not been developed for 4 years or more. Kevin Keating had already taken up a new position when I worked on the knuspr GUI interface to RCrane back in 2012. I guess there are naming discrepancies between the RCrane code and the PDB standards used by Refmac5. You might get away with fixing the RCrane code for the atom names or RNA residue names without breaking it. Make sure you have a backup, though. Best regards, Tim On Friday, April 22, 2016 02:16:03 PM Sam Tang wrote: > Hi again > > I am wondering if anyone has the experience using a plugin in Coot called > RCrane to build RNA and then refine with Refmac. It happens that refmac > cannot recognize my di-/tri-nucleotide and complains of missing atoms. No > problem for single nucleotides built from the Coot library. > > Would be glad if anyone with similar experience could share further on > this. > > Thanks in advance. > > Kind regards > > Sam > > Biochemistry Programme, School of Life Sciences, CUHK - -- - -- Paul Scherrer Institut Tim Gruene - - persoenlich - OFLC/102 CH-5232 Villigen PSI phone: +41 (0)56 310 5297 GPG Key ID = A46BEE1A -----BEGIN PGP SIGNATURE----- Version: GnuPG v2 iD8DBQFXGnz4UxlJ7aRr7hoRAoGtAJ4xt+GPojZIviBdaMMOQsuuIo/cIQCggfAm GLr2Z5CCs+fxMm5m34gfO7c= =upQ2 -----END PGP SIGNATURE-----