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Se below. On Fri, Jul 24, 2015 at 11:58 AM, Aser A <[log in to unmask]> wrote: > One more thing sorry, > > Is it possibly to display a colour bar for the activation on the render? > > On Fri, Jul 24, 2015 at 6:54 PM, Aser A <[log in to unmask]> wrote: > >> Hi all, >> >> I have two questions regarding Displaying renders or canonical cortex in >> SPM. I am able to do them via the render option in the main window > >> Display > select the cortex in the canonical folder in SPM > then select >> the SPM.mat needed and the contrast. >> >> However I have two questions: >> >> >> 1- Is it possible to do this and display it for a ROI ? for example saved >> in a nifiti file rather than liming the displaying for the SPM.mat ? If so >> how? At the same time is it possible to visualise only a ROI within the >> SPM.mat. For example if I would like just to show activations in the a >> specific area A, I want just to show the display of the SPM.mat of this >> area in the render? >> > You need to mask the data when you threshold it. > >> 2- Is there any possiblity of knowing the anatomical regions using for >> example SPM anatomy ? >> > You could use FIVE (mrtools.mgh.harvard.edu) or you could use peak_nii ( www.nitrc.org/projects/peak_nii) > >> Thanks >> >> Aser >> > >