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Hi Stephen, I’m much less familiar with using command line and I’m a bit strapped for time. Could I simply run the GUI and uncheck all of the pre-stats options? I notice that the only thing I can’t turn off is the spatial smoothing that is set at 5mm. Will this result in a different output than the command line? -- Mayte Parada Ph.D. ____________________________ Laboratory for the Biopsychosocial Study of Sexuality McGill University 1205 Docteur Penfield Montreal QC Canada H3A 1B1 [log in to unmask]<mailto:[log in to unmask]> (514) 398-5323 On May 25, 2015, at 10:16 AM, Stephen Smith <[log in to unmask]<mailto:[log in to unmask]>> wrote: Hi - I guess that if you already did all the preprocessing and alignment stuff then it's probably simplest to run the tensor-ICA using command-line melodic. Make sure all your cleaned preprocessed 4D files are in standard space and create a text file list of those for passing into melodic. Cheers. On 25 May 2015, at 10:00, Mayte Parada <[log in to unmask]<mailto:[log in to unmask]>> wrote: Hello, I’ve “cleaned” files using FIX and would iike to run a group Tensor-ICA on these cleaned files and I’m wondering if any of the settings in the pre-stats tab should be kept on since these tasks were already done for each individual singlesession ica? Typically I have Motion correction, BET brain extraction, and highpass filtering on. -- Mayte Parada Ph.D. ____________________________ Laboratory for the Biopsychosocial Study of Sexuality McGill Universit 1205 Docteur Penfield Montreal QC Canada H3A 1B1 [log in to unmask]<mailto:[log in to unmask]> (514) 398-5323 --------------------------------------------------------------------------- Stephen M. Smith, Professor of Biomedical Engineering Associate Director, Oxford University FMRIB Centre FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK +44 (0) 1865 222726 (fax 222717) [log in to unmask]<mailto:[log in to unmask]> http://www.fmrib.ox.ac.uk/~steve --------------------------------------------------------------------------- Stop the cultural destruction of Tibet<http://smithinks.net/>