Dear Melanie,
you can install the AAL atlas in SPM12 by running this:
atlas_dir = fullfile(spm('Dir'),'atlas');
mkdir(spm('Dir'),'atlas');
untar('http://www.gin.cnrs.fr/AAL/aal_for_SPM12.tar.gz',atlas_dir);
movefile(fullfile(atlas_dir,'aal_for_SPM12','AAL.*'),atlas_dir);
then for a given binary image (one of your 256 ROIs), you can get AAL
labels with:
spm_atlas('list','installed','-refresh');
[Q,P] = spm_atlas('query','AAL','ROI_xx.nii');
where Q and P will contain the list of labels within the ROI and their
proportions.
If you need something more specific, just let us know more details about
the files you have and the exact output you need.
Best regards,
Guillaume.
On 26/04/15 17:19, Dani, Melanie wrote:
> Hi,
>
>
>
> Can you tell me where I can find the labels for the AAL atlas for SPM12?
>
> I’m looking for somewhere that I can find an anatomic label for each of
> the 256 ROIs..
>
>
>
> Many thanks
>
>
>
> Melanie
--
Guillaume Flandin, PhD
Wellcome Trust Centre for Neuroimaging
University College London
12 Queen Square
London WC1N 3BG
