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Hi,

Were you able to successfully run tbss_4_prestats and create the all_FA_skeletonized file?

I am getting a similar error 

"creating skeleton mask using threshold .2
creating skeleton distancemap (for use in projection search)
projecting all FA data onto skeleton
/usr/pubsw/packages/fsl/fsl-5.0.2.2-centos5_64/bin/tbss_4_prestats: line 99: 22245 Killed                  ${FSLDIR}/bin/tbss_skeleton -i mean_FA -p $thresh mean_FA_skeleton_mask_dst ${FSLDIR}/data/standard/LowerCingulum_1mm all_FA all_FA_skeletonised

now run stats - for example:
randomise -i all_FA_skeletonised -o tbss -m mean_FA_skeleton_mask -d design.mat -t design.con -n 500 --T2 -V
(after generating design.mat and design.con)"

My N = 291 and I am also trying to run it on a virtual machine... 
If so, how did you get it to work?

Thanks!
Marybel