You have to build a surface using recon-all, which will automatically produces the  folders you need.

 

On Mon, Nov 24, 2014 at 3:12 PM, zhang mingxia <[log in to unmask]> wrote:

Thanks. So the surface(or the structure) of the subject is not needed in this step? Do i need to put the structural image into the main folder of each subject? 

I thought "-surface self lhrh" means to do surface-based on lh and rh of self. Thus, there should be a surface or a structural image in the folder of self.

Mingxia

On Mon, Nov 24, 2014 at 1:17 PM, xunheng wang <[log in to unmask]> wrote:

"self" is the subject name : 001,002,or 003,...

so "self" should be the main folder of a subject

On Mon, Nov 24, 2014 at 11:34 AM, zhang mingxia <[log in to unmask]> wrote:

Hello,

I have a question when I use "preproc-sess -surface self lhrh -fwhm 5". How can I get this "self"? What the directory of "self" should be?

Thank you again.

Mingxia

On Fri, Nov 21, 2014 at 10:54 AM, xunheng wang <[log in to unmask]> wrote:

https://surfer.nmr.mgh.harvard.edu/fswiki/FsFastIndividualRetinotopyAnalysis

On Fri, Nov 21, 2014 at 10:31 AM, zhang mingxia <[log in to unmask]> wrote:

Dear FSL experts,

I wonder whether there is analysis package for retinotopic mapping analysis. If no, what is the simplest way to analyse the retinotopic experiment data?

Thanks!

Mingxia