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Thanks. I read its manual, it only speaks about converting dcm to nii, but my main problem is converting 1142 3D nii images to 4D nii. Any suggestion? I do appreciate your attention. BR, Elahe' On Sun, Nov 2, 2014 at 10:01 AM, Stephen Smith <[log in to unmask]> wrote: > Hi - try Chris Rorden's latest and greatest conversion tool: > > https://www.nitrc.org/plugins/mwiki/index.php/dcm2nii:MainPage#General_Usage > Cheers > > > On 2 Nov 2014, at 05:07, elahe' yargholi <[log in to unmask]> wrote: > > Dear FSL experts, > > I usually use mricron to convert dicom images to 4D nii, but this time my > 4D data has 1142 volumes and mricron did not work so used mri_convert or > unpacksdcm from freesurfer. They produced the 4D data, but the > anterior-posterior is (left to right) in opposite direction of previous 4D > data or MNI atlas and the fsl registration is incorrect. what is the safest > way to correct that? > > > > I do appreciate your attention. > > BR, > Elahe > > > > --------------------------------------------------------------------------- > Stephen M. Smith, Professor of Biomedical Engineering > Associate Director, Oxford University FMRIB Centre > > FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK > +44 (0) 1865 222726 (fax 222717) > [log in to unmask] http://www.fmrib.ox.ac.uk/~steve > --------------------------------------------------------------------------- > > Stop the cultural destruction of Tibet <http://smithinks.net> > > > > >