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Sorry, fslmeants all_fa_skeletonized -c .... El 24/10/2014 15:33, "Rosalia Dacosta Aguayo" <[log in to unmask]> escribió: > Hi Anderson, > > Should I first do a mask including only those significant coordinates? > > or fslmeants tfce_p_tstat - c 99 158 86?? This make sense for you if I am > only interested on the values at these coordinates? > > Thanks, > Rosalia. > El 24/10/2014 15:16, "Rosalia Dacosta Aguayo" <[log in to unmask]> > escribió: > >> Hi Anderson, >> >> Do you refer to the group mask? or to the tfce_p_tstat? I would like >> measures for those specific coordinates, not the whole mask...is this >> possible?, how could I get this? >> >> I have used fslmeants with -c option and it does not work...I get only >> values of 1 or 0... :-( >> Thank you >> Rosalia. >> El 24/10/2014 15:10, "Anderson M. Winkler" <[log in to unmask]> >> escribió: >> >>> Hi Rosalia, >>> >>> The fslmeants works with 3D and with 4D files, but here it sounds as >>> you'd need as the input the same 4D file that was used in randomise. >>> >>> All the best, >>> >>> Anderson >>> >>> >>> On 24 October 2014 08:50, Rosalia Dacosta Aguayo <[log in to unmask]> >>> wrote: >>> >>>> Dear FSL experts, >>>> >>>> I have seen that with fslmeants it is possible to extract individual >>>> values for a peak coordinate using -c flag....However, fslmeants usage >>>> seems to be intended for filtered_func_data.... >>>> >>>> Could I use fslmeants with my tbss_FA_tfce_p_tstat1.nii.gz contrast? >>>> >>>> Thank you again, >>>> Rosalia. >>>> >>>> 2014-10-24 9:22 GMT+02:00 Rosalia Dacosta Aguayo <[log in to unmask]>: >>>> >>>>> Dear FSL experts, >>>>> >>>>> I have been working wiht TBSS. After randomise, I have found >>>>> significant cluster for FA and RD (p = 0.001 not TFCE corrected) for a >>>>> single coordinate: 99 158 86 >>>>> >>>>> I am interested in measuring individual values, for every subject, >>>>> specifically at these coordinates. >>>>> >>>>> I have been looking at fslstats flags and I have not seen any >>>>> option.... >>>>> >>>>> I do not know if I should make a mask for those coordinates and then >>>>> try with fslstats... >>>>> >>>>> Any help with this would be very appreciate. >>>>> >>>>> Yours sincerely, >>>>> Rosalia. >>>>> >>>> >>>> >>>