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Dear Matyáš, you can use the saved p-images that are log-scaled: % p-value -log10(1-P) % 0.1 1 % 0.05 1.3 % 0.01 2 % 0.001 3 % 0.0001 4 If you want to threshold the image at p<0.001 simply use imcal with "i1.*(i1>3) (or cg_slice_overlay_ui.m). The log-scaling allows linear scaled p-values in the colorbar. There exist both uncorrected p-maps and as well as FDR or FWE corrected maps (indicated with the abbreviation). The numbering for the p-maps is according to the number in the contrast manager. And of course you can use the TFCE toolbox for mice. Regards, Christian On Tue, 8 Jul 2014 14:17:41 +0200, Matyáš <[log in to unmask]> wrote: >Dear all, > >I am using TFCE toolbox from Christian Gaser to do TFCE correction after >my VBM analysis of mice (using spmmouse). I can't view the results since >it is for mice so I would like to access only the output files from TFCE >toolbox. I would like to know, how can I find the exact value of >threshold displayed on plot called "Distribution of maximum tfce" from >this toolbox, so I could threshold my TFCE images to view results. Is it >stored somewhere in SPM.mat file? > >And is it OK to use this toolbox for mice at all? :) > >Thank you in advance, > >Matyas