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Thanks all! Following your advise, things seem to be going well! Best, Ikko 2014-07-03 0:55 GMT+09:00 Stamatios Sotiropoulos < [log in to unmask]>: > Hi Ikko > > There is no "- - g" option, but a “-g" one. Retry using: > > bedpostx <datadir> -n 3 -model 2 -g > > Cheers > Stam > > > > On 2 Jul 2014, at 14:41, 木村一皓 <[log in to unmask]> wrote: > > > Dear all, > > > > I'm now using NVIDA CUDA 5.5, Grid Engine 2011.11, Centos 6.5, fsl 5.06. > > When I try to run bedpostx_gpu from HCP data like this, > > > > bedpostx_gpu <subject directory> --n=3 --model=2 --g > > > > then came > > > > subjectdir is <subject directory> > > subjectdir is <subject directory> > > Making bedpostx directory structure > > Copying files to bedpost directory > > Queuing parallel processing stage > > Queuing post processing stage > > Type <subject directory>.bedpostX/monitor to show progress. > > Type <subject directory>.bedpostX/cancel to terminate all the queued > tasks. > > You will get an email at the end of the post-processing stage. > > > > When I typed <subject directory>.bedpostX/monitor, there came the > problem as follows. > > > > 0 parts processed of 67 > > All parts processed > > > > And, when I tried bedpostx instead of bedpostx_gpu, neither was > successful, with " 0 parts processed of 67 All parts processed." > > How could it occur? Am I missing some steps? > > > > Best, > > Ikko > > > > > >