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Hi Manuel, Can you tell me exactly how you are calling both flirt and fnirt? Are the images oriented in the same way (i.e. left<->right, posterior<->anterior, inferior<->superior)? How bad is the registration when using flirt? Attach some screenshots to your reply if possible. Thanks, Paul On Tue, Jul 8, 2014 at 5:09 PM, Manuel Blesa <[log in to unmask]> wrote: > Hi Paul, > > I did as you told me, but doesn't work. > > With the FLIRT after calculate the inverse matrix the result is similar to > register the template to the subject space. And if I try the FNIRT, appears > the following message: Exception thrown with message: std::bad_alloc. > > Maybe the image is too weight? or the images are too much different? > > Regards, > > Manuel Blesa >