Hi!!
I performed TBSS with two independent samples (generating two different skeletons). What should I do if I pretend to compare the results from both analyses (i.e. in terms of spatial distribution)? One idea, I presume, is to use the FMRIB58_FA mean FA image and its derived skeleton instead of mean sample skeleton in the postreg step for both samples (though it is not strongly recommended). However I would like to know if, somehow, is possible to align the masks (and the apply such transformations to the results) after running main analyses.
Thank you very much in advance