Dear FSL experts,
I desperately need your help! I am trying
to preform group ICA on resting state data using Melodic and have been
running into a serious difficulty. While melodic seems to work fine for single
subject analysis or even group ICA on only a limited number of participants it
is unable to run my entire data set (n=73).
At the very start of
the analysis the progress report appears to freeze at:
/bin/cp /tmp/feat_5cCO9X.fsf design.fsf
mkdir .files;cp /Applications/fsl/doc/fsl.css
.files;ln -s /Applications/fsl/doc/images .files/images
Melodic progress report for the first subject generates this error
message:
/Applications/fsl/bin/fslmaths C/subj_011/SE9/rest
prefiltered_func_data -odt float
Cannot open volume C/subj_011/SE9/rest for
reading!
FATAL ERROR ENCOUNTERED
Cannot open volume C/subj_011/SE9/rest for
reading!
while
executing
"if { [ catch {
for { set argindex 1 } { $argindex < $argc } {
incr argindex 1 } {
switch
-- [ lindex $argv $argindex ] {
-I {
incr argin..."
(file
"/Applications/fsl/bin/feat" line 119)
I have no idea what it means by “cannot
open volume for reading” because, as mentioned previously, the dataset (including
subj_011) works fine for many other types of analysis. If anyone else has had a
similar problem or may suspect what the matter is please let me know.
Thanks in advance and a happy Easter,
John
--------------------
John Broulidakis
Developmental Brain-Behaviour Laboratory
University of Southampton