There are lots of GLUCOSE type lib files for different sugars.
One way to find what is available is:
From the REfinement GUI click Monomer library sketcher

You get a window with File in the top LH corner
Click on that and ask for Read monomer from library

Then enter a key word GLUCOSE and you get this list
ADQ etc etc

Select what you want and go from there..

Or do this crude method to get a complete list!:

[ccp4@roo timm]$ grep -i glucose $CLIBD/monomers/*/*



/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/a/ADQ.cif:ADQ      ADQ 'ADENOSINE-5'-DIPHOSPHATE-GLUCOSE    ' non-polymer        61  38 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/a/AGL.cif:AGL      AGL '4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE ' pyranose           24  11 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/b/BG6.cif:BG6      BG6 'BETA-D-GLUCOSE-6-PHOSPHATE          ' non-polymer        27  16 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/b/BGC.cif:BGC      BGC 'BETA-D-GLUCOSE                      ' pyranose           24  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/d/D6G.cif:D6G      D6G '2-DEOXY-GLUCOSE-6-PHOSPHATE         ' pyranose           26  15 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/d/DDA.cif:DDA      DDA '2,6-DIDEOXY-BETA-D-GLUCOSE          ' pyranose           22  10 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/g/G16.cif:G16      G16 'ALPHA-D-GLUCOSE 1,6-BISPHOSPHATE    ' pyranose           30  20 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/g/G1P.cif:G1P      G1P 'ALPHA-D-GLUCOSE-1-PHOSPHATE         ' pyranose           27  16 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/g/G2F.cif:G2F      G2F '2-DEOXY-2FLUORO-GLUCOSE             ' pyranose           23  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/g/G4D.cif:G4D      G4D '4-DEOXY-ALPHA-D-GLUCOSE             ' pyranose           23  11 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/g/G6D.cif:G6D      G6D '6-DEOXY-ALPHA-D-GLUCOSE             ' non-polymer        23  11 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/g/G6P.cif:G6P      G6P 'ALPHA-D-GLUCOSE-6-PHOSPHATE         ' pyranose           27  16 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/g/G6Q.cif:G6Q      G6Q 'GLUCOSE-6-PHOSPHATE                 ' non-polymer        27  16 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/g/GDA.cif:GDA      GDA '4-DEOXY-4-AMINO-BETA-D-GLUCOSE      ' non-polymer        25  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/g/GFP.cif:GFP      GFP '2-DEOXY-2-FLUORO-ALPHA-D-GLUCOSE-1-P' pyranose           26  16 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/g/GLC-B-D.cif:GLC-b-D  GLC 'beta_D_glucose                      ' D-pyranose         24  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/g/GLC.cif:GLC      GLC 'ALPHA-D-GLUCOSE                     ' pyranose           24  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/g/GLD.cif:GLD      GLD '4,6-DIDEOXYGLUCOSE                  ' pyranose           22  10 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/g/GLF.cif:GLF      GLF '1-FLUORO-ALPHA-1-DEOXY-D-GLUCOSE    ' pyranose           23  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/g/GLO.cif:GLO      GLO 'D-GLUCOSE IN LINEAR FORM            ' non-polymer        24  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/g/GLT.cif:GLT      GLT '5-DEOXY-5-THIO-ALPHA-D-GLUCOSE      ' non-polymer        24  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/g/GMM.cif:GMM      GMM 'GLUCOSE MONOMYCOLATE                ' non-polymer       200  74 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/g/GUD.cif:GUD      GUD 'GLUCOSE-URIDINE-C1,5'-DIPHOSPHATE   ' non-polymer        58  36 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/i/ISX.cif:ISX      ISX 'GLUCOSE BETA-1,3-ISOFAGAMINE        ' non-polymer        44  21 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/k/KBG.cif:KBG      KBG '2-KETO-BETA-D-GLUCOSE               ' non-polymer        22  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:ADQ      ADQ 'ADENOSINE-5'-DIPHOSPHATE-GLUCOSE    ' non-polymer        61  38 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:AGL      AGL '4,6-DIDEOXY-4-AMINO-ALPHA-D-GLUCOSE ' pyranose           24  11 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:BG6      BG6 'BETA-D-GLUCOSE-6-PHOSPHATE          ' non-polymer        27  16 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:BGC      BGC 'BETA-D-GLUCOSE                      ' pyranose           24  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:D6G      D6G '2-DEOXY-GLUCOSE-6-PHOSPHATE         ' pyranose           26  15 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:DDA      DDA '2,6-DIDEOXY-BETA-D-GLUCOSE          ' pyranose           22  10 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:G16      G16 'ALPHA-D-GLUCOSE 1,6-BISPHOSPHATE    ' pyranose           30  20 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:G1P      G1P 'ALPHA-D-GLUCOSE-1-PHOSPHATE         ' pyranose           27  16 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:G2F      G2F '2-DEOXY-2FLUORO-GLUCOSE             ' pyranose           23  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:G4D      G4D '4-DEOXY-ALPHA-D-GLUCOSE             ' pyranose           23  11 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:G6D      G6D '6-DEOXY-ALPHA-D-GLUCOSE             ' non-polymer        23  11 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:G6P      G6P 'ALPHA-D-GLUCOSE-6-PHOSPHATE         ' pyranose           27  16 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:G6Q      G6Q 'GLUCOSE-6-PHOSPHATE                 ' non-polymer        27  16 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:GDA      GDA '4-DEOXY-4-AMINO-BETA-D-GLUCOSE      ' non-polymer        25  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:GFP      GFP '2-DEOXY-2-FLUORO-ALPHA-D-GLUCOSE-1-P' pyranose           26  16 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:GLC      GLC 'ALPHA-D-GLUCOSE                     ' pyranose           24  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:GLD      GLD '4,6-DIDEOXYGLUCOSE                  ' pyranose           22  10 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:GLF      GLF '1-FLUORO-ALPHA-1-DEOXY-D-GLUCOSE    ' pyranose           23  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:GLO      GLO 'D-GLUCOSE IN LINEAR FORM            ' non-polymer        24  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:GLT      GLT '5-DEOXY-5-THIO-ALPHA-D-GLUCOSE      ' non-polymer        24  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:GMM      GMM 'GLUCOSE MONOMYCOLATE                ' non-polymer       200  74 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:GUD      GUD 'GLUCOSE-URIDINE-C1,5'-DIPHOSPHATE   ' non-polymer        58  36 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:ISX      ISX 'GLUCOSE BETA-1,3-ISOFAGAMINE        ' non-polymer        44  21 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:KBG      KBG '2-KETO-BETA-D-GLUCOSE               ' non-polymer        22  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:MGL      MGL 'O1-METHYL-GLUCOSE                   ' pyranose           27  13 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:MUG      MUG '4-METHYLUMBELLIFERYL-ALPHA-D-GLUCOSE' non-polymer        42  24 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:GLC-b-D  GLC 'beta_D_glucose                      ' pyranose           24  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:OPG      OPG 'OXIRANPSEUDOGLUCOSE                 ' non-polymer        24  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:TOA      TOA '3-DEOXY-3-AMINO GLUCOSE             ' pyranose           26  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:TOC      TOC '2,3,6-TRIDEOXY-2,6-DIAMINO GLUCOSE  ' pyranose           27  11 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:UPG      UPG 'URIDINE-5'-DIPHOSPHATE-GLUCOSE      ' non-polymer        58  36 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif:VG1      VG1 'ALPHA-D-GLUCOSE-1-PHOSPHATE-6-VANADA' pyranose           31  20 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif: NAG-b-L  NAG-b-D  SUG-b-L  beta_L_N-acetyl-Glucose          L-pyranose
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif: GLC-b-L  GLC-b-D  SUG-b-L  beta_L_glucose                   L-pyranose
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif: NAG-a-D  NAG-b-D  SUG-a-D  alpha_D_N-acetyl-Glucose         D-pyranose
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif: GLC-a-D  GLC-b-D  SUG-a-D  alpha_D_glucose                  D-pyranose
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif: NAG-a-L  NAG-b-D  SUG-a-L  alpha_L_N-acetyl-Glucose         L-pyranose
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/list/mon_lib_list.cif: GLC-a-L  GLC-b-D  SUG-a-L  alpha_L_glucose                  L-pyranose
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/m/MGL.cif:MGL      MGL 'O1-METHYL-GLUCOSE                   ' pyranose           27  13 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/m/MUG.cif:MUG      MUG '4-METHYLUMBELLIFERYL-ALPHA-D-GLUCOSE' non-polymer        42  24 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/o/OPG.cif:OPG      OPG 'OXIRANPSEUDOGLUCOSE                 ' non-polymer        24  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/t/TOA.cif:TOA      TOA '3-DEOXY-3-AMINO GLUCOSE             ' pyranose           26  12 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/t/TOC.cif:TOC      TOC '2,3,6-TRIDEOXY-2,6-DIAMINO GLUCOSE  ' pyranose           27  11 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/u/UPG.cif:UPG      UPG 'URIDINE-5'-DIPHOSPHATE-GLUCOSE      ' non-polymer        58  36 .
/y/people/ccp4/ccp4-6.4.0/lib/data/monomers/v/VG1.cif:VG1      VG1 'ALPHA-D-GLUCOSE-1-PHOSPHATE-6-VANADA' pyranose           31  20 .





On 5 March 2014 15:23, Remie Fawaz-Touma <[log in to unmask]> wrote:


Hi,

I am trying to refine (Refmac5 on CCP4) a protein structure containing ligands that are exclusively glucose units but refinement fails because I don't have a lib file for the sugars. Can I get help on making lib files please?

Thank you,

Remie