Hi,

For cortical structures you should use FreeSurfer.

All the best,
        Mark

On 6 Jan 2014, at 21:38, Ran Xu <[log in to unmask]> wrote:

> Dear FSL lists,
>
> I am using the FIRST to segment the subcortical structures, but I am interested in shapes of other cortical structures. So is there a tool, like FIRST, to compare the cortical structure shape (Cingulate Gyrus)?
>
> Thanks,
>
> Ran
>
>