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FDR and FWE are statistical corrections. You can't apply them to non-statistical images. Please use the spmT_0001.img image instead.

Also, if you want to see the anatomical boundaries, you need to load the anatomical atlas as an overlay in FIVE as well.

Best Regards, Donald McLaren
=================
D.G. McLaren, Ph.D.
Research Fellow, Department of Neurology, Massachusetts General Hospital and
Harvard Medical School
Postdoctoral Research Fellow, GRECC, Bedford VA
Website: http://www.martinos.org/~mclaren
Office: (773) 406-2464
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On Wed, Nov 20, 2013 at 8:50 PM, Andy Yeung <[log in to unmask]> wrote:
Dear Dr McLaren,

Thanks for your reply. I have installed FIVE into SPM Toolbox. It's working with atlas.
But when I tried to overlay results (eg con_0001.img) onto the brain map, I couldn't click FDR or FWE correction because it will cause loads of error messages in the command window.
Is there a possible way to check anatomical boundaries together with activation results in place?
Thanks in advance.

Best,
Andy


On Wed, Nov 20, 2013 at 7:20 AM, MCLAREN, Donald <[log in to unmask]> wrote:
Load the wfu_pickatlas region labels into a viewer. For example, you could load aal_MNI_V4.img into FIVE (Functional Image Visualization Environment) and see the region borders and locations. You can do this for any atlas.

Best Regards, Donald McLaren
=================
D.G. McLaren, Ph.D.
Research Fellow, Department of Neurology, Massachusetts General Hospital and
Harvard Medical School
Postdoctoral Research Fellow, GRECC, Bedford VA
Website: http://www.martinos.org/~mclaren
Office: (773) 406-2464
=====================
This e-mail contains CONFIDENTIAL INFORMATION which may contain PROTECTED
HEALTHCARE INFORMATION and may also be LEGALLY PRIVILEGED and which is
intended only for the use of the individual or entity named above. If the
reader of the e-mail is not the intended recipient or the employee or agent
responsible for delivering it to the intended recipient, you are hereby
notified that you are in possession of confidential and privileged
information. Any unauthorized use, disclosure, copying or the taking of any
action in reliance on the contents of this information is strictly
prohibited and may be unlawful. If you have received this e-mail
unintentionally, please immediately notify the sender via telephone at (773)
406-2464 or email.


On Mon, Nov 18, 2013 at 6:40 AM, Andy Yeung <[log in to unmask]> wrote:
Hi everyone,

I would like to know if there're any convenient softwares/SPM extensions that I can use to identify the boundaries of every single anatomical landmarks.

For example, I can enter the activated voxel MNI coordinates into wfupickatlas to check its corresponding region, but I can't know where the border of that particular region lies.

Can anyone help? Thanks in advance.

Best,
Andy