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Predicting original sizes of animals from the parts that survive
archaeologically is a daily task for archaeozoologists.  It’s not inherently bad that most of the
formulae we use are three, four or five generations old.  What can be bad about the formulae is that
they assume shape is constant regardless of size.  For example, if you calculate shoulder height
by multiplying humerus length by some number, you  are assuming that number (the
proportion of shoulder height to humerus length) is constant for all shoulder
heights.  This is bad because that proportions is almost never constant; we all know
from experience that animal shape is not constant, it varies with size (the calf is not the same build as the cow, the foal is not the same build as the horse, etc.).  So most animals change shape as they change size:
they exhibit allometric growth.  So insisting on simple proportions won't work well.
Also, there are large numbers of dimensions that can be
measured on an animal's bones, or even on a particular bone, so it is difficult to know which dimension is the
best predictor of size, and whether using more than one dimension would give
better predictions.  
This has been a concern of mine for over a decade.  I have recently published a paper on how to
derive accurate size reconstruction formulae from surviving dimensions in an
archaeologically important but badly-preserved animal:  
Campbell, G.E. (2013): Size prediction in
archaeomalacology: the Common Mussel, Mytilus
edulis L., as an example.  Archaeological and Anthropological Sciences.
doi: 10.1007/s12520-013-0155-2
The technique incorporates the most common form
of allometric growth, it uses standard statistical software, and it weeds out
the dimensions that are not good predictors, leaving the ones that are. It does
deal with a marine shell, and it is rude to recommend one’s own paper, but I
feel the technique should be applied more widely, or at least debated by the wider
zooarch community.
I look forward to your comments.
Greg Campbell
The Naïve Chemist
 
PS: despite my previous rants about lack of open-access, the editors at AAS did work hard to produce the paper, and therefore I will not be handing out free .pdf copies, at least not until a decent interval has passed.