We have been trying to run pointless on a large mtz file which seems to be allocating more than 1.5Gb of memory resulting in the following error:
The program run with command: /Applications/ccp4-6.3.0/bin/pointless
has failed with error message
pointless(507) malloc: *** mmap(size=1577435136) failed (error code=12)
*** error: can't allocate region
*** set a breakpoint in malloc_error_break to debug
We are using OSX 10.8.4 and believe that we need a 64bit version of pointless.
Looking at the pre release ftp site, we found the latest versions of pointless compiled for OSX 10.8, however they do not run.
dyld: Symbol not found: __ZNSt11range_errorD1Ev
Referenced from: /Applications/ccp4-6.3.0/bin/pointless-1.8.7.osx10.8
Expected in: /usr/lib/libstdc++.6.dylib
in /Applications/ccp4-6.3.0/bin/pointless-1.8.7.osx10.8
Any help would be greatly appreciated (and any know if there is a upcoming release of a pre-compiled CCP4 OSX-64bit??)
Regards
Sheena