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On 5 Jun 2013, at 15:05, Satrajit Ghosh <[log in to unmask]> wrote: > > Hi - FSL has never allowed NaNs - they can be removed using fslmaths. > > thanks steve, i did that. > > my surprise was that while bet segfaulted, fslview did fine loading the file with nans. that must be because fslview is more fully open source... > (so perhaps not all of fsl :) ) > > cheers, > > satra > > On 5 Jun 2013, at 03:11, Satrajit Ghosh <[log in to unmask]> wrote: > >> found the issue - the file had nans in it. perhaps that could be tested during read. >> >> cheers, >> >> satra >> >> On Tue, Jun 4, 2013 at 9:40 PM, Satrajit Ghosh <[log in to unmask]> wrote: >> hi all, >> >> i'm running into a segfault trying to bet this file. any thoughts? >> >> https://dl.dropboxusercontent.com/u/363467/mean_cannot_bet.nii.gz >> >> cheers, >> >> satra >> >> > > > --------------------------------------------------------------------------- > Stephen M. Smith, Professor of Biomedical Engineering > Associate Director, Oxford University FMRIB Centre > > FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK > +44 (0) 1865 222726 (fax 222717) > [log in to unmask] http://www.fmrib.ox.ac.uk/~steve > --------------------------------------------------------------------------- > > Stop the cultural destruction of Tibet > > > > > --------------------------------------------------------------------------- Stephen M. Smith, Professor of Biomedical Engineering Associate Director, Oxford University FMRIB Centre FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK +44 (0) 1865 222726 (fax 222717) [log in to unmask] http://www.fmrib.ox.ac.uk/~steve --------------------------------------------------------------------------- Stop the cultural destruction of Tibet