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Hi Saad:

When I ran the command " fslmeants -i all_FA_skeletonised  -m intersect_tractskelt", it gave me the following scores.

0.456964
0.461828
0.442304
0.463190
0.479879
0.465549
0.470622
0.441875
0.441875
0.426727
0.430490
0.449900
0.436449
0.456262
0.449847
0.438255
0.436350
0.463313
0.403764
0.436829
0.436501
0.457099
0.468719

Are these the mean FA scores for 23 subjects across the entire brain?

thanks,

Alan