> Hi - FSL has never allowed NaNs - they can be removed using fslmaths. > thanks steve, i did that. my surprise was that while bet segfaulted, fslview did fine loading the file with nans. (so perhaps not all of fsl :) ) cheers, satra On 5 Jun 2013, at 03:11, Satrajit Ghosh <[log in to unmask]> wrote: > > found the issue - the file had nans in it. perhaps that could be tested > during read. > > cheers, > > satra > > On Tue, Jun 4, 2013 at 9:40 PM, Satrajit Ghosh <[log in to unmask]> wrote: > >> hi all, >> >> i'm running into a segfault trying to bet this file. any thoughts? >> >> https://dl.dropboxusercontent.com/u/363467/mean_cannot_bet.nii.gz >> >> cheers, >> >> satra >> >> > > > --------------------------------------------------------------------------- > Stephen M. Smith, Professor of Biomedical Engineering > Associate Director, Oxford University FMRIB Centre > > FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK > +44 (0) 1865 222726 (fax 222717) > [log in to unmask] http://www.fmrib.ox.ac.uk/~steve > --------------------------------------------------------------------------- > > Stop the cultural destruction of Tibet <http://smithinks.net> > > > > >