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Hi,

This is output that you asked.
And I tried installation with -D as you suggested, It didn't work either.
How can I install newest FSL?


YM Huh


HY-Leeui-iMac:/usr/local] debobkr% ls /usr/local
bin fsl_installer.sh share
fsl include texlive
fsl-4-1.1.6-macosx.tar lib
fsl_40 sbin


[HY-Leeui-iMac:/usr/local] debobkr% ls -ld /usr/local/
drwxr-xr-x  13 debobkr  admin  442  4 26 15:55 /usr/local/


[HY-Leeui-iMac:~/Downloads] debobkr% python fslinstaller.py -D
--- FSL Installer - Version 2.0.9 ---
[Warning] Some operations of the installer require administative rights, for example installing into the default folder of /usr/local. If your account is an 'Administrator' (you have 'sudo' rights) then you will be prompted for your administrator password when necessary.
Calculating fastest mirror
Recieved the following mirror list ['http://fsl.fmrib.ox.ac.uk/fsldownloads/']
Looking for latest version at http://fsl.fmrib.ox.ac.uk/fsldownloads/fslinstaller.py-version.txt.
Found a version number of 2.0.9.
Installer is up-to-date.
[OK] Installer is current
Where would you like to install FSL? [/usr/local]: 
Your answer was 
You want the default
Returning the answer /usr/local
Install folder /usr/local, FSLDIR is /usr/local/fsl
FSL exists in the current location, would you like to keep the old version? [No]: yes
Your answer was yes
Returning the answer True
Looking for latest version at http://fsl.fmrib.ox.ac.uk/fsldownloads/latest-version.txt.
Found a version number of 5.0.2.2.
Downloading FSL version 5.0.2.2 (this may take some time)
Attempting to download http://fsl.fmrib.ox.ac.uk/fsldownloads/fsl-5.0.2.2-macosx.tar.gz.
Checking download...        
Downloading http://fsl.fmrib.ox.ac.uk/fsldownloads/md5sums/fsl-5.0.2.2-macosx.tar.gz.md5 to check /var/folders/dT/dTir0p9DHamsxH8Vilh5dE+++TI/-Tmp-/tmpsXb8aP
Attempting to download http://fsl.fmrib.ox.ac.uk/fsldownloads/md5sums/fsl-5.0.2.2-macosx.tar.gz.md5.
Compairing: dbda5703ac480cb7c9a249b8b156cd4c to dbda5703ac480cb7c9a249b8b156cd4c
/var/folders/dT/dTir0p9DHamsxH8Vilh5dE+++TI/-Tmp-/tmpsXb8aP verified.
MD5 sum of install file fsl-5.0.2.2-macosx.tar.gz correct.
[OK] Download is good.
Checking /usr/local is writeable.
Installing FSL software...
Untarring to /usr/local into temporary folder fsl-16315-1367299239.67.
Will call ['mkdir', '/usr/local/fsl-16315-1367299239.67']
Command completed successfully ()
Calling tar -C /usr/local/fsl-16315-1367299239.67 -x -v -f /var/folders/dT/dTir0p9DHamsxH8Vilh5dE+++TI/-Tmp-/tmpsXb8aP
Will call ['rm', '-rf', '/usr/local/fsl-16315-1367299239.67']
Command completed successfully ()
Will call ['rm', '-f', '/var/folders/dT/dTir0p9DHamsxH8Vilh5dE+++TI/-Tmp-/tmpsXb8aP']
Command completed successfully ()
"The contents of /usr/local doesn't look like an FSL installtion - will not install here, aborting install" ; 
[FAILED] "The contents of /usr/local doesn't look like an FSL installtion - will not install here, aborting install" ; 
[HY-Leeui-iMac:~/Downloads] debobkr% 









2013/4/26 Duncan Mortimer <[log in to unmask]>
Two things, please. Could you send the output of:

ls /usr/local
ls -ld /usr/local

and then run the installer with -D, eg

python fslinstaller.py -D

and send the output.

Duncan
On 26 Apr 2013, at 08:41, YM Huh wrote:

> Hi,
> I tried to update FSL for newest version.
> There are many files I worked with old version, so I renamed fsl folder and moved it to /usr/local to keep the old version.
> And I tried to install new version at /usr/local/fsl, but it aborted with following message.
>
> Checking download...
> [OK] Download is good..
> Installing FSL software...
> [FAILED] "The contents of /usr/local doesn't look like an FSL installtion - will not install here, aborting install" ;
>
> how can I fix this?
> I would appreciate any comments.
>
>
> YM Huh

--
Duncan A B Mortimer DPhil MChem
                Computing Officer, FMRIB Centre, University of Oxford,
              John Radcliffe Hospital, Headington, Oxford OX3 9DU, UK.
Tel: (0)1865 222713              email: [log in to unmask]
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