To be specific, I used fslmaths to average the 10 B0 images. Then used fslsplit to split apart all the DTI scan volumes. I removed the first volume (the B0 image) and then used fslmerge to merge the 1 volume of the averaged 10 B0 images with the 64 DTI volumes. Then I performed eddy correction.P mean to say "How did you got B0 image , from where did you get this image . By using FSLnodi command or something else"
--New Delhi,IndiaBiomedical Engineering DepartmentSanjeev NaraResearch Intern
INMAS-DRDO