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Hi, is there any way of using spm_coreg or other function to estimate an
affine transform that includes shear rather than just the 6 parameter rigid
body transform?

I've looked at spm_affreg but this routine, as far as I can tell, can only
apply a least squares cost function as opposed to the richer options in
spm_coreg.

I want to register CT scan volumes which may have been acquired with gantry
tilt, hence the need for a shear.

Many thanks
Mathew