Catherine...any suggestions?My input would be the all_FA.niiHi Saad,I have used the fslroi tool to extract voxel masks with specific x,y,x coordinates.To exclude the x and y vector maps to get the z vector map what parameters would I choose?
fslroi <input> <output> <xmin> <xsize> <ymin> <ysize> <zmin> <zsize>
Thank you,
On Thu, Apr 4, 2013 at 4:12 AM, Saad Jbabdi <[log in to unmask]> wrote:
Hi - you can use fslroi for this.SaadOn 3 Apr 2013, at 22:58, Nucleos P wrote:Hello experts -
Would you happen to know any programs or scripts that could help create individual x, y, z vector maps from a primary eigenvector map?
Currently, I use FSL and get both dyads1* output from the bedpostx and V1 output from dtifit.
I would like to find a way to extract the 3 vector components from the maps.
Thanks in advance for your time and help,
Catherine--Saad JbabdiUniversity of Oxford, FMRIB CentreJR Hospital, Headington, OX3 9DU, UK(+44)1865-222466 (fax 717)