Dear FSL experts,
I would like segmenting Corpus Callosum into five regions. I have been thinking about doing the following steps:
1. Register my skull_stripped MPRAGE image to MNI152_T1_2mm template
2. Segment corpus callosum in the registered MPRAGE by hand-drawing and saving the corpus callosum as a mask.
3. Registering diffusion image to MNI152_T1_2mm template
4. Add corpus callosum mask to the registered diffusion image.
Question: I am having problems with the second step: I do not know how to segment this anatomical region into 5 or maybe 7 segments.
Any suggestion would be very appreciate.
Yours sincerely,
Rosalia.